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Changelog

stcsanalysis 0.1.11

  • stcs_select_table(): handle filter of for the valuemetadata

stcsanalysis 0.1.10

  • tailored_organsurvival(): remove “next_tpxdate” as it depends on the inconsistent “organ_order” variable.
  • stcs_read(): check version using package_version()

stcsanalysis 0.1.9

  • adaptation for AT 0.0.5

stcsanalysis 0.1.8

  • stcs_select_organrelevance(): improve warning message.
  • add donheight in tailored_transplantationbl()

stcsanalysis 0.1.7

  • include tailored_tables()
  • change write_stcs_csv() to allow every
  • remove reference to diagnosis_category
  • categorization breaks for AT before: 2024-08-30

stcsanalysis 0.1.6

  • Tested on AT from: 2024-05-01, 2024-05-14, 2024-05-21, 2024-06-17
  • correction for AT 0.0.1: pnf_date in tailored_organsurvival(),
  • correction for AT 0.0.1: handle new disease_category in categorize_diagnosis(),
  • add variable in tailored_organsurvival(): next_tpxdate, next_organspecific_tpxdate
  • add variable in tailored_organbl(): bmi
  • correction in category_diagnosis.
  • add variable in tailored_patientbl(): istreat

stcsanalysis 0.1.5

  • Tested on AT from: 2024-02-13, 2024-02-06, 2024-02-01,
  • Developed AT from: 2024-02-13,
  • which.pmin_chr() include ties argument
  • new utils function noinf_min()
  • add_var(): debug when by is multiple columns
  • change parametrization of categorize function using .startdate, .stopdate.
  • add bl tailored tables: tailored_patientbl(), tailored_transplantationbl()
  • rename serology_combinaison() to serology_combination()
  • add categorize_organevent(), categorize_organintervention()
  • set tz = “Europe/Zurich”, for date time.
  • remove future_stcs_read() and dependency to future, listenv

stcsanalysis 0.1.4

  • Tested on AT from: 2024-02-13
  • Developed AT from: 2024-02-13,
  • add consent_comment in stcs_anonymize()

stcsanalysis 0.1.3

  • Tested on AT from: 2024-02-06
  • Developed AT from: 2024-02-06,
  • correction paste_valuecomment

stcsanalysis 0.1.2

  • Tested on AT from: 2024-02-01
  • Developed AT from: 2024-02-01,
  • add pkgdown

stcsanalysis 0.1.1

  • Tested on AT from: 2024-02-01
  • Developed AT from: 2024-02-01,
  • add crf_status in patientsurvival
  • add transplantationsurvival
  • add categorize_pathogenspecies()
  • add consent withdrawal in patient survival
  • handle infsite in categorize_pathogenspecies

stcsanalysis 0.1.0

  • Tested on AT from: 2024-01-24
  • Developed AT from: 2024-01-24, 2024-01-15, 2023-12-11, 2023-10-18
  • Added a NEWS.md file to track changes to the package.
  • add_var function()
  • read_stcs()+ future_read_stcs()
  • write_stcs_csv() + write_stcs_xlsx()
  • data_patientkey(), data_organkey(), data_soaskey()
  • recode(), age_int(), which.pmin()
  • stcs_filter_patientkey(), stcs_select_organ(), stcs_select_table(), stcs_anonymize()
  • impute_lastday()